Runnable examples - skeleton filesΒΆ

   
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run anatomical dataset basics skl Anatomical dataset basics In this example, load a brain as a CoSMoMVPA datset and visualize it in matlab
run bad double dipping analysis skl Double dipping
run classify lda skl odd-even classification with LDA classifier
run classify naive bayes skl Two-class classification with naive baysian classifier
run classify svm skl Classification using svm
run compare dsm skl RSA Tutorial Compare DSMs
run correlation measure skl Exercise with cosmo_correlation_measure Split-half correlation analysis using cosmo_correlation_measure
run cross validation skl Cross validation example with multiple classifiers This example runs cross validation and shows confusion matrix using multiple classifiers
run crossvalidation measure skl Cross validation measure example This example runs cross validation with the cosmo_crossvalidation_measure function, using a classifier with n-fold crossvalidation. It shows the confusion matrices using multiple classifiers
run crossvalidation searchlight skl Crossvalidation searchlight
run dataset basics skl Dataset basics
run demean skl Example of de-meaning
run feature selection classifier skl An example of using feature selection with a classifier
run fmri correlation searchlight trivial skl Demo: fMRI searchlights with split-half correlation
run load datasets skl Dataset Basics Load datasets using cosmo_fmri_dataset
run measure searchlight skl Searchlight using a data measure
run meeg time generalization skl MEEG time generalization in a region (in space-time) of interest
run meeg timefreq measures skl MEEG time-frequency searchlight
run meeg timelock measures skl MEEG time-lock searchlight
run multiple comparison correction skl Multiple comparison correction with Threshold-Free Cluster Enhancement
run nfold crossvalidate skl n-fold cross-validation classification with LDA classifier
run nifti basics skl NIFTI basics In this example, load a brain and visualize it in matlab
run operations on datasets skl Dataset Basics Run operations on datasets
run permutation test skl Permutation test example
run roi neighborhood skl ROI neighborhood example
run rsa visualize skl RSA Visualize
run rsm measure searchlight skl Searchlight for representational similarity analysis
run setting sample attr skl Dataset Basics (setting sample attributes)
run sphere offsets searchlight skl Searchlight analysis in the volume
run sphere offsets skl Show sphere offsets for used in spherical neighborhood
run spherical neighborhood searchlight skl Spherical searchlight this example implements a spherical searchlight using cosmo_spherical_neighborhood and performs crossvalidation with a nearest neigh classifier
run splithalf correlations searchlight skl Volumetric fMRI Searchlight
run splithalf correlations single sub skl Roi-based MVPA for single subject (run_split_half_correlations_single_sub)
run splithalf correlations skl roi-based MVPA with group-analysis